STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51586.1Dipeptidyl-peptidase 7; InterPro IPR000126: IPR 019500; KEGG: phe:Phep_2038 hypothetical protein; PFAM: Peptidase S46; SPTR: Putative uncharacterized protein; PFAM: Peptidase S46. (722 aa)    
Predicted Functional Partners:
ADY51585.1
KEGG: phe:Phep_2037 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.700
ADY51502.1
WD40-like beta Propeller containing protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659; KEGG: cpi:Cpin_0591 peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat.
  
   
 0.509
ADY51589.1
COGs: COG1956 GAF domain-containing protein; InterPro IPR003018; KEGG: cpi:Cpin_4732 GafA; GAF domain-containing protein; SMART: GAF domain protein; SPTR: GAF domain-containing protein involved in signal transduction; PFAM: GAF domain.
 
     0.434
ADY51319.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR008454: IPR 012910: IPR 000531; KEGG: phe:Phep_0220 TonB-dependent receptor plug; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Cna B domain protein; SPTR: TonB-dependent receptor plug.
  
     0.403
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.