STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51677.1COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR002081: IPR 018394: IPR 006050: IPR 005101; KEGG: cpi:Cpin_6960 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribodipyrimidine photolyase-class I; PFAM: FAD binding domain of DNA photolyase; DNA photolyase. (448 aa)    
Predicted Functional Partners:
ADY52930.1
Cryptochrome, DASH family; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050: IPR 005101: IPR 014133; KEGG: phe:Phep_3718 cryptochrome, DASH family; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; SPTR: Cryptochrome, DASH family; TIGRFAM: cryptochrome, DASH family; PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: cryptochrome, DASH family.
 
    
0.547
ADY52769.1
COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937: IPR 000759: IPR 014105; KEGG: phe:Phep_2093 phytoene desaturase; PFAM: amine oxidase; SPTR: Phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
 
  
 0.536
ADY52770.1
COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR019845: IPR 002060; KEGG: phe:Phep_2092 phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase; PFAM: Squalene/phytoene synthase.
 
   
 0.518
ADY52772.1
COGs: COG4276 conserved hypothetical protein; KEGG: phe:Phep_2090 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.456
ADY52329.1
Chalcone and stilbene synthase domain protein; COGs: COG3424 naringenin-chalcone synthase; InterPro IPR001099: IPR 012328: IPR 003006: IPR 011141; KEGG: llo:LLO_1607 naringenin-chalcone synthase; PFAM: chalcone and stilbene synthase domain protein; SPTR: Putative Naringenin-chalcone synthase; PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain.
    
   0.430
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.430
ADY52229.1
KEGG: bja:bll1926 hypothetical protein; SPTR: Bll1926 protein.
  
 
   0.408
ADY52044.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.401
ADY54067.1
Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.401
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.