STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51774.1Helix-turn-helix domain protein; InterPro IPR001387: IPR 019759; KEGG: phe:Phep_1912 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; Peptidase S24/S26A/S26B, conserved region; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator; PFAM: Helix-turn-helix. (257 aa)    
Predicted Functional Partners:
ADY52472.1
KEGG: phe:Phep_1171 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.619
ADY51773.1
KEGG: phe:Phep_1913 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.590
ADY53529.1
KEGG: phe:Phep_0048 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.569
ADY53268.1
KEGG: phe:Phep_0401 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104).
  
     0.554
ADY54380.1
KEGG: phe:Phep_3608 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.511
ADY52471.1
InterPro IPR019734: IPR 013026: IPR 001440; KEGG: phe:Phep_1172 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide domain protein.
  
     0.475
ADY50628.1
KEGG: phe:Phep_0803 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.474
ADY52910.1
KEGG: phe:Phep_3442 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.472
ADY50714.1
KEGG: phe:Phep_3332 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.469
ADY53750.1
KEGG: phe:Phep_4030 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.464
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.