STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51805.1Hypothetical protein; KEGG: dmo:Dmoj_GI24072 GI24072 gene product from transcript GI24072-RA. (49 aa)    
Predicted Functional Partners:
ADY51804.1
Peptidase M20; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR 011650; KEGG: phe:Phep_1438 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Peptidase, family M20/M25/M40 and dimerization domain; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain.
       0.518
ADY51806.1
Histidine kinase A domain protein; InterPro IPR003661: IPR 019734: IPR 013026; KEGG: cpi:Cpin_4076 histidine kinase; PFAM: histidine kinase A domain protein; SMART: histidine kinase A domain protein; Tetratricopeptide repeat; SPTR: Serine/threonine protein kinases.
       0.488
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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