STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY51942.1KEGG: dfe:Dfer_0184 hypothetical protein; SPTR: Putative uncharacterized protein. (179 aa)    
Predicted Functional Partners:
ADY51940.1
Anti-anti-sigma factor; InterPro IPR002645: IPR 003658; KEGG: dfe:Dfer_0182 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
       0.831
ADY51941.1
COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789: IPR 010822: IPR 001932; KEGG: dfe:Dfer_0183 response regulator receiver protein; PFAM: response regulator receiver; Stage II sporulation protein E; SMART: response regulator receiver; protein phosphatase 2C domain protein; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).
       0.774
ADY51939.1
Hypothetical protein; KEGG: dfe:Dfer_0181 putative anti-sigma regulatory factor, serine/threonine protein kinase; SPTR: Putative anti-sigma regulatory factor, serine/threonine protein kinase.
       0.768
ADY51943.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: phe:Phep_2030 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
       0.609
ADY51944.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: phe:Phep_2031 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
       0.598
ADY51938.1
KEGG: cts:Ctha_0375 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.441
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.