STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52100.1KEGG: sfl:CP0196 hypothetical protein; SPTR: Putative uncharacterized protein. (164 aa)    
Predicted Functional Partners:
ADY52099.1
Hypothetical protein; KEGG: pha:PSHAb0057 putative Zn-dependent aminopeptidase; SPTR: Putative uncharacterized protein.
       0.773
ADY52098.1
Phage/plasmid-related protein TIGR03299; InterPro IPR017686; KEGG: fjo:Fjoh_2980 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: phage/plasmid-related protein TIGR03299; PFAM: Domain of unknown function (DUF932); TIGRFAM: phage/plasmid-related protein TIGR03299.
       0.619
ADY52101.1
RES domain protein; InterPro IPR014914; KEGG: nhl:Nhal_0239 RES domain protein; PFAM: RES domain protein; SPTR: Putative uncharacterized protein; PFAM: RES domain.
       0.406
ADY52102.1
KEGG: fjo:Fjoh_2998 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.406
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.