STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52292.1COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: sli:Slin_1740 ABC-type Na+ efflux pump permease component-like protein; SPTR: ABC-type Na+ efflux pump permease component-like protein. (433 aa)    
Predicted Functional Partners:
ADY52291.1
ABC transporter related protein; COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439: IPR 017871: IPR 003593; KEGG: sli:Slin_1739 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
 
  
 0.973
ADY52294.1
COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: cpi:Cpin_5174 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; SPTR: Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase family.
       0.788
ADY52293.1
KEGG: cpi:Cpin_2982 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.705
ADY52290.1
COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR009056; KEGG: sli:Slin_2895 glucose sorbosone dehydrogenase; SPTR: Putative uncharacterized protein; PFAM: Glucose / Sorbosone dehydrogenase.
       0.595
ADY52295.1
COGs: COG0015 Adenylosuccinate lyase; InterPro IPR000362: IPR 004769: IPR 013539: IPR 020557; KEGG: phe:Phep_2933 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase domain-containing protein; fumarate lyase; PRIAM: Adenylosuccinate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.557
ADY51319.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR008454: IPR 012910: IPR 000531; KEGG: phe:Phep_0220 TonB-dependent receptor plug; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Cna B domain protein; SPTR: TonB-dependent receptor plug.
  
     0.504
ADY52558.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: dfe:Dfer_1623 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.406
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.