STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52298.1KEGG: phe:Phep_3008 hypothetical protein; SPTR: Putative uncharacterized protein. (89 aa)    
Predicted Functional Partners:
ADY51908.1
Hypothetical protein; InterPro IPR017936; KEGG: phe:Phep_2456 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: AhpC/TSA family.
  
     0.716
ADY50657.1
KEGG: coc:Coch_0565 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.653
ADY52300.1
KEGG: phe:Phep_3010 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.635
ADY52299.1
Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151: IPR 001478; KEGG: phe:Phep_3009 peptidase S41; PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; peptidase S41; SPTR: Peptidase S41; PFAM: Peptidase family S41.
       0.613
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
       0.560
ADY53701.1
COGs: COG3247 conserved hypothetical protein; KEGG: coc:Coch_1436 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.531
ADY52301.1
Hypothetical protein; KEGG: vap:Vapar_1935 carbamoyl phosphate synthase-like protein; SPTR: Putative uncharacterized protein.
       0.519
ADY51038.1
TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR 000531; KEGG: fjo:Fjoh_4821 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.503
ADY52785.1
InterPro IPR000182; KEGG: fjo:Fjoh_4884 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
  
     0.462
ADY50681.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_1589 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.459
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.