STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52325.1COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: phe:Phep_1536 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1. (380 aa)    
Predicted Functional Partners:
ADY52324.1
LmbE family protein; InterPro IPR003737; KEGG: phe:Phep_1535 LmbE family protein; PFAM: LmbE family protein; SPTR: LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase.
 
  
 0.958
ADY52326.1
Amylo-alpha-16-glucosidase; InterPro IPR010401; KEGG: phe:Phep_1537 hypothetical protein; PFAM: Amylo-alpha-16-glucosidase; SPTR: Putative uncharacterized protein; PFAM: Plant neutral invertase.
 
 
 0.957
ADY52043.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterPro IPR005844: IPR 005845: IPR 005846: IPR 019775: IPR 016066: IPR 005841; KEGG: phe:Phep_2334 glucose-1,6-bisphosphate synthase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; SPTR: Glucose-1,6-bisphosphate synthase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, a [...]
  
 
 0.906
ADY51097.1
Nucleotidyl transferase; COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR005836: IPR 005835: IPR 001451; KEGG: fba:FIC_00777 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; SPTR: Glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.904
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
     
 0.901
ADY53359.1
COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: phe:Phep_0133 starch synthase; PFAM: Starch synthase catalytic domain-containing protein; PRIAM: Starch synthase; SPTR: Starch synthase; PFAM: Starch synthase catalytic domain.
     
 0.901
ADY51768.1
HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006402: IPR 005834; KEGG: phe:Phep_1518 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
   
 
 0.805
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.567
ADY51898.1
KEGG: gem:GM21_0651 polysaccharide deacetylase; SPTR: Polysaccharide deacetylase.
 
     0.517
ADY51890.1
Glycosidase related protein; COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: phe:Phep_1454 glycosidase PH1107-related; PFAM: glycosidase related protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Domain of unknown function (DUF377).
  
     0.508
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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