STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52370.1RagB/SusD domain protein; InterPro IPR012944; KEGG: phe:Phep_2828 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family. (565 aa)    
Predicted Functional Partners:
ADY52371.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR 000531; KEGG: phe:Phep_2829 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
 
   0.947
ADY52369.1
InterPro IPR012480; KEGG: phe:Phep_3797 heparinase II/III family protein; PFAM: Heparinase II/III family protein; SPTR: Heparinase II/III family protein; PFAM: Heparinase II/III-like protein.
 
     0.858
ADY52365.1
Heparinase II/III family protein; InterPro IPR012480; KEGG: phe:Phep_2833 hypothetical protein; PFAM: Heparinase II/III family protein; SPTR: Putative uncharacterized protein; PFAM: Heparinase II/III-like protein.
 
 
   0.822
ADY52353.1
TonB-dependent receptor; InterPro IPR012910: IPR 000531; KEGG: phe:Phep_0770 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
 
   0.815
ADY53887.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: bth:BT_4114 hypothetical protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
 
   0.811
ADY51040.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: phe:Phep_0770 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
 
   0.800
ADY52367.1
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: phe:Phep_2826 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase.
       0.773
ADY52368.1
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: phe:Phep_2827 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase.
       0.773
ADY54142.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: phe:Phep_2710 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
 
   0.772
ADY54246.1
TonB-dependent receptor; InterPro IPR012910: IPR 000531; KEGG: phe:Phep_2829 TonB-dependent receptor plug; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.769
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.