STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52486.1Amino acid/polyamine/organocation transporter, APC superfamily; COGs: COG0531 Amino acid transporter; InterPro IPR002293: IPR 004841; KEGG: msl:Msil_0743 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region; PFAM: Amino acid permease; TIGRFAM: amino acid transporter; TC 2.A.3. (482 aa)    
Predicted Functional Partners:
ADY52484.1
COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991: IPR 018107; KEGG: bav:BAV2218 aerobic C4-dicarboxylate transport protein; PFAM: sodium:dicarboxylate symporter; SPTR: C4-dicarboxylate transport protein; PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
 
 0.716
ADY52487.1
Multiple antibiotic resistance (MarC)-related protein; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: phe:Phep_0996 multiple antibiotic resistance (MarC)-related protein; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: Putative transmembrane protein; PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family.
       0.594
ADY52485.1
COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: phe:Phep_2358 pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: Pseudouridylate synthase; PFAM: RNA pseudouridylate synthase.
       0.550
ADY51800.1
COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991: IPR 018107; KEGG: phe:Phep_1622 sodium:dicarboxylate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: Sodium:dicarboxylate symporter; PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
 
 0.527
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.513
mntH
Mn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
  
 0.474
trpF
COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: fps:FP0509 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpF family.
    
 
 0.421
ADY51177.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR 003018: IPR 013767: IPR 013655: IPR 013656: IPR 003661: IPR 003594: IPR 001789: IPR 005467: IPR 000700:I PR008207: IPR 001610: IPR 004358; KEGG: fba:FIC_01779 PAS/PAC domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC rep [...]
  
  
 0.415
ADY52778.1
Amino acid/peptide transporter; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109: IPR 005279; KEGG: phe:Phep_2904 amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; SPTR: POT family proton (H+)-dependent oligopeptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial.
  
 
 0.414
ADY51627.1
Transporter, CPA2 family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006037: IPR 006153; KEGG: phe:Phep_3551 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; SPTR: Sodium/hydrogen exchanger; PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; TC 2.A.37.
  
  
 0.409
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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