STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52558.1TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: dfe:Dfer_1623 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (1034 aa)    
Predicted Functional Partners:
ADY52557.1
InterPro IPR012944; KEGG: dfe:Dfer_1622 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
 
     0.946
ADY52554.1
Hypothetical protein; InterPro IPR020218; KEGG: sli:Slin_2732 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.858
ADY52553.1
Hypothetical protein; InterPro IPR020218; KEGG: sli:Slin_2733 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.846
ADY52555.1
COGs: COG4242 Cyanophycinase and related exopeptidase; InterPro IPR005320; KEGG: dfe:Dfer_1621 peptidase S51 dipeptidase E; PFAM: peptidase S51 dipeptidase E; SPTR: Peptidase S51 dipeptidase E; PFAM: Peptidase family S51; TIGRFAM: cyanophycinase; Belongs to the peptidase S51 family.
       0.757
ADY52556.1
COGs: COG4242 Cyanophycinase and related exopeptidase; InterPro IPR005320; KEGG: dfe:Dfer_1621 peptidase S51 dipeptidase E; PFAM: peptidase S51 dipeptidase E; SPTR: Peptidase S51 dipeptidase E; PFAM: Peptidase family S51; TIGRFAM: cyanophycinase; Belongs to the peptidase S51 family.
       0.757
ADY51366.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: phe:Phep_0755 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
  
     0.745
ADY53517.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bfs:BF0760 putative outer membrane protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: SusD family.
  
     0.742
ADY52077.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: phe:Phep_1361 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: Outer membrane protein; PFAM: SusD family.
  
     0.685
ADY54143.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: phe:Phep_2709 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
  
     0.638
ADY52088.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: phe:Phep_1361 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
  
     0.590
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.