STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52650.1KEGG: phe:Phep_3068 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2851). (429 aa)    
Predicted Functional Partners:
ADY52649.1
KEGG: phe:Phep_3067 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: PspC domain.
       0.841
ADY52651.1
COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR011995: IPR 001754; KEGG: phe:Phep_3069 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2.
       0.756
ADY50930.1
KEGG: phe:Phep_1144 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.620
ADY52825.1
KEGG: phe:Phep_0835 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.578
ADY53204.1
Hypothetical protein; InterPro IPR017441; KEGG: phe:Phep_0581 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
     0.576
ADY53448.1
KEGG: phe:Phep_4061 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.569
ADY53981.1
Rhomboid family protein; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: phe:Phep_0483 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Putative transmembrane rhomboid family protein; PFAM: Rhomboid family.
 
     0.562
ADY53742.1
KEGG: phe:Phep_4033 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.555
ADY50928.1
KEGG: phe:Phep_1142 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.539
ADY52507.1
InterPro IPR005632; KEGG: phe:Phep_0987 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: Cationic outer membrane protein; PFAM: Outer membrane protein (OmpH-like).
  
     0.536
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.