STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52666.1COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: dfe:Dfer_4819 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1343). (407 aa)    
Predicted Functional Partners:
ADY53985.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: phe:Phep_0479 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-N-acetylglucosaminidase; PFAM: Beta-lactamase.
  
 0.979
ADY54101.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: sli:Slin_3517 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase.
  
 0.882
ADY53375.1
Glycoside hydrolase family 3 domain protein; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: phe:Phep_4183 glycoside hydrolase family 3 domain protein; PFAM: glycoside hydrolase family 3 domain protein; SPTR: B-glycosidase, glycoside hydrolase family 3 protein; PFAM: Glycosyl hydrolase family 3 N terminal domain.
 
  
 0.774
ADY52415.1
Glycoside hydrolase family 3 domain protein; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: cpi:Cpin_0839 beta-lactamase; PFAM: glycoside hydrolase family 3 domain protein; SPTR: Beta-lactamase; PFAM: Glycosyl hydrolase family 3 N terminal domain.
 
  
 0.768
ADY52665.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: phe:Phep_1225 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
       0.674
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
       0.616
ADY52186.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: bcq:BCQ_2451 penicillin-binding protein; PFAM: beta-lactamase; SPTR: Penicillin-binding protein; PFAM: Beta-lactamase.
 
  
 0.507
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.491
murQ-2
Sugar isomerase (SIS); Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.491
ADY53828.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: phe:Phep_0159 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase.
  
 0.482
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.