STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52767.1Regulatory protein MarR; InterPro IPR000835; KEGG: phe:Phep_2094 regulatory protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Regulatory protein MarR. (218 aa)    
Predicted Functional Partners:
ADY52770.1
COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR019845: IPR 002060; KEGG: phe:Phep_2092 phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase; PFAM: Squalene/phytoene synthase.
 
   
 0.941
ADY52773.1
Fatty acid hydroxylase; InterPro IPR018247: IPR 006694; KEGG: phe:Phep_2089 fatty acid hydroxylase; PFAM: fatty acid hydroxylase; SPTR: Fatty acid hydroxylase; PFAM: Fatty acid hydroxylase superfamily.
 
    0.936
ADY52774.1
InterPro IPR017825; KEGG: phe:Phep_2088 lycopene cyclase domain protein; SPTR: Lycopene cyclase domain protein; TIGRFAM: lycopene cyclase domain protein; TIGRFAM: lycopene cyclase domain.
 
     0.935
ADY52771.1
KEGG: phe:Phep_2091 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.932
ADY52769.1
COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937: IPR 000759: IPR 014105; KEGG: phe:Phep_2093 phytoene desaturase; PFAM: amine oxidase; SPTR: Phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
 
   
 0.930
ADY52772.1
COGs: COG4276 conserved hypothetical protein; KEGG: phe:Phep_2090 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.823
ADY52768.1
Hydroxyisourate hydrolase; COGs: COG2351 Transthyretin-like protein; InterPro IPR000895: IPR 014306; KEGG: coc:Coch_0235 hydroxyisourate hydrolase; PFAM: Transthyretin; SMART: Transthyretin; SPTR: 5-hydroxyisourate hydrolase; TIGRFAM: hydroxyisourate hydrolase; PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
    0.737
ADY53582.1
COGs: COG4574 Serine protease inhibitor ecotin; InterPro IPR005658; KEGG: enc:ECL_03511 ecotin; PFAM: proteinase inhibitor I11 ecotin; SPTR: Proteinase inhibitor I11 ecotin; PFAM: Ecotin.
  
     0.478
ADY51177.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR 003018: IPR 013767: IPR 013655: IPR 013656: IPR 003661: IPR 003594: IPR 001789: IPR 005467: IPR 000700:I PR008207: IPR 001610: IPR 004358; KEGG: fba:FIC_01779 PAS/PAC domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC rep [...]
  
  
 0.406
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.