STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52771.1KEGG: phe:Phep_2091 hypothetical protein; SPTR: Putative uncharacterized protein. (153 aa)    
Predicted Functional Partners:
ADY52774.1
InterPro IPR017825; KEGG: phe:Phep_2088 lycopene cyclase domain protein; SPTR: Lycopene cyclase domain protein; TIGRFAM: lycopene cyclase domain protein; TIGRFAM: lycopene cyclase domain.
 
     0.960
ADY52767.1
Regulatory protein MarR; InterPro IPR000835; KEGG: phe:Phep_2094 regulatory protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Regulatory protein MarR.
 
     0.932
ADY52770.1
COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR019845: IPR 002060; KEGG: phe:Phep_2092 phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase; PFAM: Squalene/phytoene synthase.
 
     0.926
ADY52773.1
Fatty acid hydroxylase; InterPro IPR018247: IPR 006694; KEGG: phe:Phep_2089 fatty acid hydroxylase; PFAM: fatty acid hydroxylase; SPTR: Fatty acid hydroxylase; PFAM: Fatty acid hydroxylase superfamily.
 
     0.913
ADY52769.1
COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937: IPR 000759: IPR 014105; KEGG: phe:Phep_2093 phytoene desaturase; PFAM: amine oxidase; SPTR: Phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
 
     0.901
ADY52772.1
COGs: COG4276 conserved hypothetical protein; KEGG: phe:Phep_2090 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.828
ADY52768.1
Hydroxyisourate hydrolase; COGs: COG2351 Transthyretin-like protein; InterPro IPR000895: IPR 014306; KEGG: coc:Coch_0235 hydroxyisourate hydrolase; PFAM: Transthyretin; SMART: Transthyretin; SPTR: 5-hydroxyisourate hydrolase; TIGRFAM: hydroxyisourate hydrolase; PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
       0.755
ADY53749.1
KEGG: phe:Phep_4031 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein.
  
     0.480
ADY52647.1
Protein of unknown function DUF72; COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: chu:CHU_1402 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF72.
  
     0.411
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.