STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52777.1Amino acid/peptide transporter; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR018456: IPR 000109: IPR 005279; KEGG: phe:Phep_2903 amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; SPTR: Proton/peptide symporter family protein; TIGRFAM: amino acid/peptide transporter; PFAM: Major Facilitator Superfamily; POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial. (590 aa)    
Predicted Functional Partners:
ADY52778.1
Amino acid/peptide transporter; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109: IPR 005279; KEGG: phe:Phep_2904 amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; SPTR: POT family proton (H+)-dependent oligopeptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial.
 
    
0.647
ADY52776.1
KEGG: phe:Phep_2902 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.523
ADY52779.1
Dolichyl-phosphate beta-D-mannosyltransferase; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: phe:Phep_2905 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
       0.414
ADY52490.1
KEGG: phe:Phep_0994 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.400
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.