STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52797.1Protein of unknown function DUF202; COGs: COG2149 membrane protein; InterPro IPR003807; KEGG: cpi:Cpin_6983 protein of unknown function DUF202; PFAM: protein of unknown function DUF202; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF. (125 aa)    
Predicted Functional Partners:
ADY52796.1
KEGG: phe:Phep_3464 hypothetical protein; SPTR: Lipoprotein, putative.
       0.508
ADY51828.1
COGs: COG0438 Glycosyltransferase; KEGG: dfe:Dfer_5592 glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.416
ADY51251.1
COGs: COG1538 Outer membrane protein; KEGG: fjo:Fjoh_3070 outer membrane protein-like protein; SPTR: Outer membrane protein-like protein; PFAM: Outer membrane efflux protein.
  
     0.412
ADY52795.1
COGs: COG1092 SAM-dependent methyltransferase; KEGG: phe:Phep_3463 SAM dependent methyltransferase; SPTR: SAM dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase.
       0.407
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.