STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52799.1Protein of unknown function DUF490; COGs: COG2911 conserved hypothetical protein; InterPro IPR007844: IPR 007452; KEGG: fjo:Fjoh_1899 hypothetical protein; PFAM: protein of unknown function DUF490; AsmA family protein; SPTR: Uncharacterized protein; PFAM: Family of unknown function (DUF490). (1672 aa)    
Predicted Functional Partners:
ADY52798.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: fjo:Fjoh_1900 surface antigen (D15); PFAM: surface antigen (D15); SPTR: Surface antigen (D15); PFAM: Surface antigen.
 
   
 0.963
ADY53172.1
KEGG: phe:Phep_0286 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.791
ADY51188.1
KEGG: phe:Phep_2235 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.631
ADY53408.1
Ribonuclease BN; COGs: COG1295 membrane protein; InterPro IPR004664: IPR 017039; KEGG: sli:Slin_6562 ribonuclease BN; PFAM: ribonuclease BN; SPTR: Ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
 
     0.515
ADY52800.1
Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR017937: IPR 017936: IPR 013766: IPR 006662: IPR 005746; KEGG: phe:Phep_0867 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
       0.509
ADY50946.1
KEGG: fjo:Fjoh_2459 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.490
ADY51928.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: phe:Phep_1269 surface antigen (D15); PFAM: surface antigen (D15); SPTR: Outer membrane protein; manually curated; PFAM: Surface antigen.
 
   
 0.489
ADY53443.1
Hypothetical protein; InterPro IPR017936; KEGG: cpi:Cpin_1415 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255.
 
     0.475
ADY51895.1
KEGG: phe:Phep_0653 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.437
ADY53500.1
InterPro IPR019734: IPR 013026: IPR 001440; KEGG: phe:Phep_4083 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide domain protein.
  
     0.419
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.