STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY52913.1GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: phe:Phep_3685 GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter. (504 aa)    
Predicted Functional Partners:
ADY52284.1
acyl-CoA reductase; InterPro IPR008670; KEGG: phe:Phep_3204 acyl-CoA reductase; PFAM: acyl-CoA reductase; SPTR: Putative uncharacterized protein; PFAM: Acyl-CoA reductase (LuxC).
 
 
 0.770
ADY51808.1
KEGG: phe:Phep_1436 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
ADY51359.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160: IPR 015590; KEGG: phe:Phep_2100 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family.
  
 
 0.733
ADY53068.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.725
ADY50930.1
KEGG: phe:Phep_1144 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.672
ADY50722.1
KEGG: phe:Phep_3324 hypothetical protein; SPTR: Cell division protein FtsQ.
  
     0.614
ADY51776.1
COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055: IPR 013520; KEGG: phe:Phep_1888 exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: Exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease.
  
     0.606
ADY52914.1
ABC transporter related protein; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003593: IPR 003439; KEGG: phe:Phep_3684 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter.
       0.572
ADY52911.1
KEGG: tva:TVAG_014040 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.570
ADY52915.1
Exonuclease RecJ; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667: IPR 003156: IPR 004610; KEGG: phe:Phep_3683 single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Single-strand DNA specific exonuclease; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ.
       0.566
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.