STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53070.1Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: chu:CHU_0166 outer membrane protein; PFAM: surface antigen (D15); SPTR: Outer membrane protein, OMP85 family, putative. (550 aa)    
Predicted Functional Partners:
ADY50931.1
Outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: phe:Phep_1145 outer membrane assembly lipoprotein YfiO; SPTR: Conserved hypothetical lipoprotein; TIGRFAM: outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO.
  
 
 0.804
ADY53069.1
KEGG: phe:Phep_0381 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.790
ADY53068.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.788
ADY53420.1
Hypothetical protein; InterPro IPR005829; KEGG: fjo:Fjoh_0539 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.778
ADY50743.1
KEGG: chu:CHU_1567 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.777
ADY51781.1
KEGG: chu:CHU_1568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
ADY53278.1
KEGG: fjo:Fjoh_1483 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.767
ADY53796.1
KEGG: chu:CHU_3705 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.715
ADY52376.1
KEGG: chu:CHU_2139 CHU large protein, SAP or adhesin AidA-related; SPTR: Probable aggregation factor core protein MAFp3, isoform C, putative.
  
     0.679
ADY51570.1
TonB-dependent receptor; InterPro IPR012910: IPR 000531; KEGG: phe:Phep_1856 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.670
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.