STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53305.1Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: phe:Phep_0214 penicillinase repressor; PFAM: Penicillinase repressor; SPTR: Putative antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor. (127 aa)    
Predicted Functional Partners:
ADY53306.1
TonB family protein; InterPro IPR008756: IPR 006260; KEGG: phe:Phep_0213 TonB family protein; PFAM: peptidase M56 BlaR1; SPTR: TonB; TIGRFAM: TonB family protein; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
  
 0.965
ADY54189.1
TonB family protein; InterPro IPR006260: IPR 008756; KEGG: phe:Phep_0213 TonB family protein; PFAM: TonB domain; peptidase M56 BlaR1; SPTR: TonB family protein; TIGRFAM: TonB family protein; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
  
 0.820
ADY52153.1
Copper-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR001756: IPR 001757: IPR 006403: IPR 006416: IPR 006121: IPR 008250: IPR 005834: IPR 018303: IPR 017969: IPR 000150; KEGG: cat:CA2559_00260 putative copper transport-related membrane protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Copper-exporting ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily [...]
  
  
 0.590
ADY53304.1
Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
       0.508
ADY52156.1
KEGG: fjo:Fjoh_3064 hypothetical protein; SPTR: MerP family protein; PFAM: Heavy-metal-associated domain; Protein of unknown function (DUF3347).
 
  
 0.486
ADY50625.1
InterPro IPR006121; KEGG: dfe:Dfer_3107 hypothetical protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Putative uncharacterized protein; PFAM: Heavy-metal-associated domain.
  
  
 0.403
ADY51153.1
Heavy metal transport/detoxification protein; COGs: COG2608 Copper chaperone; InterPro IPR017969: IPR 006121: IPR 001802; KEGG: zpr:ZPR_3374 putative mercuric transport protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Putative mercuric transport protein; PFAM: Heavy-metal-associated domain; MerT mercuric transport protein.
  
  
 0.403
ADY52137.1
Heavy metal transport/detoxification protein; InterPro IPR003457: IPR 006121: IPR 017969; KEGG: zpr:ZPR_3374 putative mercuric transport protein; PFAM: Heavy metal transport/detoxification protein; Mercuric transport protein MerT; SPTR: Mercuric transport protein; PFAM: Heavy-metal-associated domain; MerT mercuric transport protein.
  
  
 0.403
ADY52154.1
InterPro IPR006121; KEGG: cat:CA2559_00265 hypothetical protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Putative uncharacterized protein; PFAM: Heavy-metal-associated domain.
  
  
 0.403
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.