STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53310.1KEGG: fjo:Fjoh_4415 hypothetical protein; SPTR: Putative uncharacterized protein. (670 aa)    
Predicted Functional Partners:
ADY53309.1
COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019: IPR 004597; KEGG: phe:Phep_4216 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I.
       0.535
ADY53974.1
KEGG: bvu:BVU_0426 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.494
ADY53567.1
COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: chu:CHU_3500 anti-sigma regulatory factor; PFAM: ATP-binding region ATPase domain protein; SPTR: Anti-sigma regulatory factor; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 
 0.488
ADY53311.1
KEGG: phe:Phep_3103 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.472
ADY53308.1
COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: phe:Phep_4229 integral membrane protein TerC; PFAM: Integral membrane protein TerC; SPTR: Integral membrane protein TerC; PFAM: Integral membrane protein TerC family.
  
    0.422
ADY51177.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR 003018: IPR 013767: IPR 013655: IPR 013656: IPR 003661: IPR 003594: IPR 001789: IPR 005467: IPR 000700:I PR008207: IPR 001610: IPR 004358; KEGG: fba:FIC_01779 PAS/PAC domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC rep [...]
   
 
 0.420
ADY53133.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR 005467: IPR 001789: IPR 003660: IPR 007891: IPR 003018: IPR 003661: IPR 003594; KEGG: cpi:Cpin_5566 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase HAMP region domain protein; GAF domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; GAF domain protein; response regulator receiver; SP [...]
  
 
 0.409
ADY52263.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR 007891: IPR 003661: IPR 003594: IPR 001789: IPR 005467; KEGG: phe:Phep_0587 ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: ATP-binding region ATPase domain protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His [...]
   
 
 0.405
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.