STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53313.1COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712: IPR 003594; KEGG: cpi:Cpin_3101 histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (441 aa)    
Predicted Functional Partners:
ADY53315.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792: IPR 001789; KEGG: cpi:Cpin_3102 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.941
ADY51998.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR 000792; KEGG: phe:Phep_2735 response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Transcriptional regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.873
ADY52245.1
COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: ttr:Tter_0300 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Possible response regulator; PFAM: Response regulator receiver domain.
 
 
 0.847
ADY52786.1
Transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: cpi:Cpin_1440 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Transcriptional regulator, LuxR family protein; PFAM: Bacterial regulatory proteins, luxR family.
 
 
 0.818
ADY52967.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR 000792; KEGG: cat:CA2559_05930 DNA-binding response regulator, LuxR family protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: DNA-binding response regulator, LuxR family protein; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.795
ADY53471.1
KEGG: phe:Phep_1539 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2154).
  
  
 0.791
ADY53314.1
Hypothetical protein; KEGG: phe:Phep_3101 helix-turn-helix-domain containing protein AraC type; SPTR: Helix-turn-helix-domain containing protein AraC type.
      
0.773
ADY52790.1
KEGG: phe:Phep_3458 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.732
ADY51177.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR 003018: IPR 013767: IPR 013655: IPR 013656: IPR 003661: IPR 003594: IPR 001789: IPR 005467: IPR 000700:I PR008207: IPR 001610: IPR 004358; KEGG: fba:FIC_01779 PAS/PAC domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC rep [...]
  
 
 0.707
ADY52263.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR 007891: IPR 003661: IPR 003594: IPR 001789: IPR 005467; KEGG: phe:Phep_0587 ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: ATP-binding region ATPase domain protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His [...]
  
 
 0.637
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.