STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53344.1WxcM-like protein; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR018357: IPR 001451; KEGG: sdl:Sdel_1783 WxcM-like protein; SPTR: Lipopolysaccharide biosynthesis protein; PFAM: Bacterial transferase hexapeptide (three repeats). (183 aa)    
Predicted Functional Partners:
ADY53757.1
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: cpi:Cpin_4762 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.933
ADY53345.1
WxcM-like domain-containing protein; InterPro IPR008894; KEGG: mmb:Mmol_0915 WxcM domain protein; PFAM: WxcM-like domain-containing protein; SPTR: WxcM domain protein; manually curated; PFAM: WxcM-like, C-terminal.
      0.922
ADY53758.1
Transferase hexapeptide repeat containing protein; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR001451; KEGG: hhe:HH1661 hypothetical protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial transferase hexapeptide (three repeats).
 
  
0.911
ADY53768.1
WxcM-like protein; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: sdl:Sdel_1783 WxcM-like protein; SPTR: WxcM-like protein; PFAM: Bacterial transferase hexapeptide (three repeats).
  
  
 
0.902
ADY53343.1
Glutamine--scyllo-inositol transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: plu:plu4813 WblQ protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: WblQ protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.848
ADY53767.1
WxcM-like domain-containing protein; InterPro IPR008894; KEGG: mmb:Mmol_0915 WxcM domain protein; PFAM: WxcM-like domain-containing protein; SPTR: WxcM domain protein; PFAM: WxcM-like, C-terminal.
      0.821
ADY53341.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: pfl:PFL_0524 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: Predicted protein; PFAM: Glycosyl transferase family 2.
     
 0.780
ADY53340.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: phe:Phep_0148 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
    0.779
ADY53342.1
Hypothetical protein; COGs: COG4421 Capsular polysaccharide biosynthesis protein; KEGG: cbe:Cbei_2590 capsular polysaccharide biosynthesis -like protein; SPTR: Putative uncharacterized protein.
       0.779
ADY53346.1
WxcM-like domain-containing protein; InterPro IPR008894; KEGG: bfr:BF3663 hypothetical protein; PFAM: WxcM-like domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: WxcM-like, C-terminal.
       0.778
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.