STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53429.1Transcriptional regulator, DeoR family; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR018356: IPR 001034: IPR 014036; KEGG: phe:Phep_0568 regulatory protein DeoR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: Regulatory protein DeoR; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain. (260 aa)    
Predicted Functional Partners:
ADY53430.1
COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR000447: IPR 006076; KEGG: phe:Phep_0569 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase.
 
  
 0.780
ADY53431.1
KEGG: phe:Phep_1387 hypothetical protein; SPTR: Putative hydrolase lipoprotein.
     
 0.536
ADY53709.1
Major intrinsic protein; COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: phe:Phep_4188 MIP family channel protein; PFAM: major intrinsic protein; SPTR: MIP family channel protein; PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.507
ADY53432.1
KEGG: cpo:COPRO5265_0823 HD/KH domain protein; SPTR: HD/KH domain protein.
       0.408
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.