STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53638.1Hypothetical protein; InterPro IPR017441; KEGG: fba:FIC_00184 hypothetical protein; SPTR: Conserved domain protein. (445 aa)    
Predicted Functional Partners:
ADY53643.1
KEGG: rxy:Rxyl_3137 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Beta-galactosidase.
 
     0.782
ADY53641.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pdi:BDI_3134 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.761
ADY53640.1
TonB-dependent receptor; InterPro IPR011662: IPR 012910: IPR 000531; KEGG: pdi:BDI_3133 hypothetical protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; SPTR: Putative uncharacterized protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain.
 
     0.655
ADY51032.1
KEGG: bth:BT_2961 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.646
ADY53639.1
anti-FecI sigma factor, FecR; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR012373: IPR 006860; KEGG: pdi:BDI_2872 putative anti-sigma factor; PFAM: FecR protein; SPTR: Putative uncharacterized protein; PFAM: FecR protein.
       0.572
ADY52470.1
COGs: COG3744 conserved hypothetical protein; InterPro IPR006596: IPR 002716; KEGG: sli:Slin_4573 PilT protein domain protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; SPTR: Toxin-antitoxin system, toxin component, PIN family; PFAM: PIN domain.
  
     0.498
ADY53644.1
alpha-L-rhamnosidase; InterPro IPR016007: IPR 013737: IPR 008902; KEGG: pdi:BDI_3139 glycoside hydrolase family protein; PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain.
 
     0.433
ADY53662.1
DoxX family protein; InterPro IPR011637; KEGG: sru:SRU_0426 DoxX subfamily protein; PFAM: DoxX family protein; SPTR: DoxX subfamily protein; PFAM: DoxX.
  
     0.430
ADY52527.1
KEGG: fba:FIC_01988 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.423
ADY53637.1
COGs: COG0657 Esterase/lipase; KEGG: phe:Phep_0283 esterase/lipase; SPTR: Esterase/lipase; PFAM: Prolyl oligopeptidase family.
       0.420
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.