STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53663.1Hypothetical protein; KEGG: bbl:BLBBGE_492 DNA gyrase subunit A; SPTR: DNA gyrase subunit A. (241 aa)    
Predicted Functional Partners:
ADY53664.1
Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: phe:Phep_3452 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold.
       0.773
ADY53662.1
DoxX family protein; InterPro IPR011637; KEGG: sru:SRU_0426 DoxX subfamily protein; PFAM: DoxX family protein; SPTR: DoxX subfamily protein; PFAM: DoxX.
       0.557
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.