STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53696.1RagB/SusD domain protein; InterPro IPR012944: IPR 002052; KEGG: cpi:Cpin_5091 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein; PFAM: SusD family. (540 aa)    
Predicted Functional Partners:
ADY53695.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531: IPR 018247; KEGG: cpi:Cpin_5092 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative uncharacterized protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
   
 0.936
ADY53697.1
KEGG: cpi:Cpin_6168 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.927
ADY53698.1
COGs: COG3867 Arabinogalactan endo-1 4-beta-galactosidase; InterPro IPR011683; KEGG: cth:Cthe_1400 glycosyl hydrolase 53; PFAM: glycosyl hydrolase 53 domain protein; PRIAM: Arabinogalactan endo-1,4-beta-galactosidase; SPTR: Arabinogalactan endo-1,4-beta-galactosidase; PFAM: Glycosyl hydrolase family 53.
 
  
 0.829
ADY53699.1
KEGG: cpi:Cpin_6170 membrane or secreted protein; SPTR: Membrane or secreted protein; PFAM: Cellulase (glycosyl hydrolase family 5).
 
    0.793
ADY53179.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: cpi:Cpin_6740 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
   
 0.575
ADY53606.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: fjo:Fjoh_2020 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
   
 0.554
ADY52411.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: phe:Phep_4126 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
   
 0.543
ADY53596.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR 000531; KEGG: phe:Phep_2722 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative uncharacterized protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
   
 0.534
ADY52190.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: bfs:BF3576 hypothetical protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
   
 0.511
ADY53887.1
TonB-dependent receptor plug; InterPro IPR012910: IPR 000531; KEGG: bth:BT_4114 hypothetical protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
   
 0.482
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.