STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53773.1COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tpe:Tpen_1723 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1. (348 aa)    
Predicted Functional Partners:
ADY53772.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cbl:CLK_2088 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
 
    0.820
ADY53771.1
Multi antimicrobial extrusion protein MatE; InterPro IPR002528; KEGG: pdi:BDI_3621 putative flippase, involved in lipopolysaccharide biosynthesis; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Lipopolysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.814
ADY53765.1
InterPro IPR003856; KEGG: phe:Phep_3948 lipopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Chain length determinant protein.
  
  
 0.777
ADY53769.1
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: sdl:Sdel_1781 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Putative uncharacterized protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.775
ADY53774.1
Hypothetical protein; KEGG: sew:SeSA_A2315 Wzy; SPTR: Wzy.
       0.773
ADY53766.1
WxcM-like domain-containing protein; InterPro IPR008894; KEGG: bfr:BF3663 hypothetical protein; PFAM: WxcM-like domain-containing protein; SPTR: WxcM-like, C-terminal protein; PFAM: WxcM-like, C-terminal.
  
    0.768
ADY53767.1
WxcM-like domain-containing protein; InterPro IPR008894; KEGG: mmb:Mmol_0915 WxcM domain protein; PFAM: WxcM-like domain-containing protein; SPTR: WxcM domain protein; PFAM: WxcM-like, C-terminal.
  
    0.768
ADY53768.1
WxcM-like protein; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: sdl:Sdel_1783 WxcM-like protein; SPTR: WxcM-like protein; PFAM: Bacterial transferase hexapeptide (three repeats).
  
    0.768
ADY53770.1
Hypothetical protein; KEGG: ere:EUBREC_0754 galactoside acetyltransferase (LacA); SPTR: Maltose acetyltransferase.
  
    0.768
ADY53775.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fjo:Fjoh_1035 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.752
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.