STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY53789.1Protein involved in gliding motility RemB; KEGG: phe:Phep_3918 hypothetical protein; SPTR: Putative uncharacterized protein. (534 aa)    
Predicted Functional Partners:
ADY53790.1
KEGG: wch:wcw_1804 hypothetical protein; SPTR: Glycosyl transferase group 1.
       0.814
ADY53788.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: phe:Phep_3919 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Putative capsular polysaccharide biosynthesis protein; PFAM: CoA binding domain; Polysaccharide biosynthesis protein.
       0.795
ADY52395.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: phe:Phep_1431 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
  
     0.722
ADY53786.1
Glycosyl transferase, family 4, conserved region; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: bfs:BF1565 putative glycosyltransferase; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Putative glycosyltransferase; PFAM: Glycosyl transferase family 4.
       0.695
ADY53268.1
KEGG: phe:Phep_0401 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104).
  
     0.613
ADY53267.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173: IPR 018054; KEGG: phe:Phep_0402 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
  
     0.594
ADY53183.1
COGs: COG4122 O-methyltransferase; KEGG: phe:Phep_0285 O-methyltransferase; SPTR: O-methyltransferase; PFAM: O-methyltransferase.
  
     0.572
ADY53787.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtp:Mthe_0961 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.
       0.556
ADY53278.1
KEGG: fjo:Fjoh_1483 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.512
ADY50639.1
Transglutaminase domain protein; InterPro IPR000215; KEGG: phe:Phep_1887 transglutaminase domain protein; SPTR: Transglutaminase domain protein.
  
     0.504
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.