STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY54282.1KEGG: afm:AFUA_1G01300 GPI anchored protein; SPTR: GPI anchored protein, putative. (426 aa)    
Predicted Functional Partners:
ADY54286.1
KEGG: bth:BT_0127 putative transmembrane protein; SPTR: Putative uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
 
     0.782
ADY54288.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR000639: IPR 001466: IPR 000073; KEGG: bvu:BVU_0119 putative beta-lactamase class C; PFAM: beta-lactamase; alpha/beta hydrolase fold; SPTR: Beta-lactamase; PFAM: Beta-lactamase; alpha/beta hydrolase fold.
 
     0.713
ADY51076.1
Glycosyl hydrolase family 88; COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: phe:Phep_0452 glycosyl hydrolase family 88; PFAM: glycosyl hydrolase family 88; SPTR: Glycosyl hydrolase family 88; PFAM: Glycosyl Hydrolase Family 88.
  
     0.701
ADY54280.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bth:BT_0141 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.694
ADY54279.1
TonB-dependent receptor plug; InterPro IPR018247: IPR 012910; KEGG: bth:BT_0140 hypothetical protein; PFAM: TonB-dependent receptor plug; SPTR: Putative outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
     0.681
ADY53896.1
Pectate lyase; InterPro IPR006626; KEGG: cac:CA_P0056 pectate lyase; SPTR: Pectate lyase, secreted, polysaccharide lyase family.
  
     0.678
ADY54278.1
Glycoside hydrolase 97; InterPro IPR019563; KEGG: bth:BT_0132 alpha-glucosidase, putative; PFAM: Glycoside hydrolase 97; SPTR: Alpha-glucosidase; PFAM: Glycoside hydrolase 97.
 
     0.610
ADY54281.1
InterPro IPR003343; KEGG: bth:BT_0142 hypothetical protein; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2).
       0.597
ADY54283.1
KEGG: sli:Slin_6600 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.464
ADY52211.1
Regulatory protein MarR; InterPro IPR000835; KEGG: chu:CHU_2098 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: MarR family transcriptional regulator; PFAM: MarR family.
  
     0.461
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.