STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY54293.1Glycoside hydrolase family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: phe:Phep_1150 glycoside hydrolase family 43; PFAM: glycoside hydrolase family 43; SPTR: Xylosidase/arabinosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (555 aa)    
Predicted Functional Partners:
ADY53901.1
Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR018040: IPR 000070; KEGG: fjo:Fjoh_4096 pectinesterase; PFAM: Pectinesterase; SPTR: Candidate pectin methylesterase; Carbohydrate esterase family 8; PFAM: Pectinesterase.
 
     0.736
ADY53903.1
InterPro IPR001087; KEGG: dfe:Dfer_1522 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family; SPTR: Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase.
 
     0.724
ADY53893.1
Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR018040: IPR 000070; KEGG: phe:Phep_1157 pectinesterase; PFAM: Pectinesterase; SPTR: Pectinesterase; PFAM: Pectinesterase.
 
     0.711
ADY51047.1
Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR018040: IPR 000070; KEGG: phe:Phep_1157 pectinesterase; PFAM: Pectinesterase; SPTR: Pectinesterase; PFAM: Pectinesterase.
 
     0.687
ADY52351.1
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: phe:Phep_0769 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family; SPTR: Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase.
 
     0.681
ADY52352.1
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: phe:Phep_0769 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family; SPTR: Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase.
 
     0.680
ADY54292.1
KEGG: rba:RB1470 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.671
ADY53892.1
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: sli:Slin_1242 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family; SPTR: Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.667
ADY54258.1
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: sli:Slin_1231 lysophospholipase L1 and related esterase-like protein; PFAM: lipolytic protein G-D-S-L family; SPTR: Putative rhamnogalacturonan acetylesterase; PFAM: GDSL-like Lipase/Acylhydrolase.
  
    0.588
ADY54229.1
Lipolytic protein G-D-S-L family; InterPro IPR001087; KEGG: bvu:BVU_0182 carbohydrate esterase family 12 protein; PFAM: lipolytic protein G-D-S-L family; SPTR: Carbohydrate esterase family 12.
  
     0.569
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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