STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY54302.1Gliding-associated putative ABC transporter substrate-binding component GldG; COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019863: IPR 019196; KEGG: phe:Phep_3236 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; PFAM: ABC-type uncharacterised transport system; SPTR: ABC-type uncharacterized transport system involved in gliding motility auxiliary component; TIGRFAM: gliding-associated putative ABC transporter substrate-binding component GldG; PFAM: ABC-type uncharacterized [...] (560 aa)    
Predicted Functional Partners:
ADY54301.1
Protein involved in gliding motility GldF; InterPro IPR019860; KEGG: phe:Phep_3237 ABC-2 type transporter; SPTR: ABC-2 type transporter; TIGRFAM: gliding motility-associated ABC transporter permease protein GldF; TIGRFAM: gliding motility-associated ABC transporter permease protein GldF.
  
 0.996
ADY54300.1
Protein involved in gliding motility GldA; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR 003439; KEGG: cpi:Cpin_1163 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA.
 
  
 0.887
ADY53572.1
Protein involved in gliding motility GldD; InterPro IPR019850; KEGG: phe:Phep_4156 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility-associated lipoprotein GldD; TIGRFAM: gliding motility-associated lipoprotein GldD.
  
   
 0.809
ADY53449.1
Protein involved in gliding motility GldJ; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: phe:Phep_4062 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Possible gliding motility-related protein; possible serine kinase; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ.
  
   
 0.804
ADY53045.1
Protein involved in gliding motility GldB; InterPro IPR019853; KEGG: phe:Phep_0409 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility-associated lipoprotein GldB; TIGRFAM: gliding motility-associated lipoprotein GldB.
  
   
 0.792
ADY54303.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
     0.787
ADY54380.1
KEGG: phe:Phep_3608 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.748
ADY51653.1
KEGG: phe:Phep_1264 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.713
ADY53061.1
Tetratricopeptide domain protein; InterPro IPR019734: IPR 013026; KEGG: phe:Phep_0389 tetratricopeptide domain protein; SPTR: Tetratricopeptide domain protein.
  
   
 0.706
ADY51634.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR019734: IPR 013026: IPR 006665: IPR 006664: IPR 001440: IPR 011659; KEGG: phe:Phep_2066 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; Tetratricopeptide TPR_1 repeat-containing protein; WD40-like beta Propeller containing protein; SPTR: OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
     0.705
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
Server load: very high (100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.