STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY54381.15'-Nucleotidase domain-containing protein; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR006179: IPR 008334; KEGG: phe:Phep_2186 5'-nucleotidase domain protein; PFAM: 5'-Nucleotidase domain-containing protein; SPTR: 5'-Nucleotidase domain protein; PFAM: 5'-nucleotidase, C-terminal domain. (251 aa)    
Predicted Functional Partners:
ADY54380.1
KEGG: phe:Phep_3608 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.709
ADY54379.1
Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR016092: IPR 017870: IPR 000361; KEGG: phe:Phep_3609 iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: HesB protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
       0.515
ADY53169.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896; KEGG: phe:Phep_0289 putative iron-sulfur binding oxidoreductase; SPTR: Putative iron-sulfur binding oxidoreductase; PFAM: Molydopterin dinucleotide binding domain.
    
 
 0.483
ADY52648.1
COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: phe:Phep_2187 glutathione peroxidase; PFAM: glutathione peroxidase; SPTR: Glutathione peroxidase; PFAM: Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 0.411
Your Current Organism:
Pseudopedobacter saltans
NCBI taxonomy Id: 762903
Other names: P. saltans DSM 12145, Pedobacter saltans DSM 12145, Pedobacter saltans LMG 10337, Pedobacter saltans str. DSM 12145, Pedobacter saltans strain DSM 12145, Pseudopedobacter saltans DSM 12145
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