STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP40825.1Septum formation initiator; Pfam: PF04977; InterPro: IPR007060. (175 aa)    
Predicted Functional Partners:
ADP41130.1
POTRA domain protein, FtsQ-type; COG: COG1589; Pfam: PF08478,PF03799.
 
 
 
 0.928
ADP40827.1
Hypothetical protein; COG: COG1507; Pfam: PF04417; InterPro: IPR007511.
 
  
 0.826
ADP40826.1
Hypothetical protein; COG: COG1507; Pfam: PF04417; InterPro: IPR007511.
 
     0.753
gppA_1
Ppx/GppA phosphatase family protein; COG: COG0248; Pfam: PF02541; InterPro: IPR003695.
  
  
 0.645
ADP41221.1
Hypothetical protein.
  
     0.641
ftsW_2
Cell cycle protein, FtsW/RodA/SpoVE family; COG: COG0772; Pfam: PF01098; InterPro: IPR001182; Belongs to the SEDS family.
   
 
 0.639
ftsW_1
Putative cell division protein FtsW; COG: COG0772; Pfam: PF01098; InterPro: IPR001182; Belongs to the SEDS family.
   
 
 0.639
pbpA
Putative penicillin-binding protein A; COG: COG0768; Pfam: PF00905; InterPro: IPR001460.
  
 
 0.603
penA
Penicillin-binding protein, transpeptidase domain protein; COG: COG0768; Pfam: PF03717,PF00905; InterPro: IPR001460.
  
 
 0.603
ADP40829.1
Putative type VII secretion-associated serine protease mycosin; COG: COG1404; Pfam: PF00082; InterPro: IPR000209.
 
    0.580
Your Current Organism:
Rothia dentocariosa
NCBI taxonomy Id: 762948
Other names: R. dentocariosa ATCC 17931, Rothia dentocariosa ATCC 17931, Rothia dentocariosa str. ATCC 17931, Rothia dentocariosa strain ATCC 17931
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