STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADP41550.1Hypothetical protein. (527 aa)    
Predicted Functional Partners:
eryK
Unspecific monooxygenase; COG: COG2124; Pfam: PF00067; InterPro: IPR001128; Belongs to the cytochrome P450 family.
   
  0.677
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.636
ADP40297.1
Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173.
  
   
 0.561
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.520
fadD_2
AMP-binding enzyme; Pfam: PF00561,PF00501; InterPro: IPR000873.
    
 0.514
ADP39863.1
Hypothetical protein.
 
  
 0.500
ADP40296.1
Hypothetical protein.
 
  
 0.493
valS
Anticodon-binding domain protein; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner.
       0.475
fcbA2
AMP-binding enzyme; COG: COG0318; Pfam: PF00501; InterPro: IPR000873.
    
  0.473
fadD_3
AMP-binding enzyme; COG: COG0318; Pfam: PF00501; InterPro: IPR000873.
    
  0.473
Your Current Organism:
Rothia dentocariosa
NCBI taxonomy Id: 762948
Other names: R. dentocariosa ATCC 17931, Rothia dentocariosa ATCC 17931, Rothia dentocariosa str. ATCC 17931, Rothia dentocariosa strain ATCC 17931
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.