STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF57719.1Tat pathway signal sequence domain protein; KEGG: rde:RD1_2561 5.3e-20 bioY; BioY family protein, putative K03523; Psort location: CytoplasmicMembrane, score: 10.00. (202 aa)    
Predicted Functional Partners:
EGF54283.1
Cobalt transport protein; KEGG: bde:BDP_0813 8.3e-52 ABC-type cobalt transport system K02006; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.977
EGF54291.1
Cobalt transport protein; KEGG: ljf:FI9785_1499 0.00013 ABC-type transport system, permease component K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.977
EGF54292.1
ABC transporter, ATP-binding protein; KEGG: snc:HMPREF0837_11109 8.4e-77 ABC superfamily transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
    
  0.695
EGF57718.1
Hydrolase, alpha/beta domain protein; KEGG: bce:BC1788 1.5e-65 lysophospholipase L2 K01048; Psort location: CytoplasmicMembrane, score: 9.55.
       0.483
EGF57720.1
KEGG: lch:Lcho_0060 3.2e-61 luciferase family protein; K00494 alkanal monooxygenase (FMN-linked); Psort location: Cytoplasmic, score: 7.50.
       0.470
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.432
EGF53505.1
MaoC-like protein; KEGG: bde:BDP_0362 0. fas; fatty acid synthase Fas K11533.
     
 0.431
EGF57724.1
Putative phosphonate C-P lyase system protein PhnK; KEGG: aai:AARI_09850 1.3e-174 dipeptide/oligopeptide ABC transporter, ATP-binding subunit; Psort location: CytoplasmicMembrane, score: 8.78.
    
  0.427
EGF53503.1
KEGG: gva:HMPREF0424_1199 2.7e-158 carbamoyl-phosphate synthase L chain, ATP binding domain protein; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein; Psort location: Cytoplasmic, score: 9.97.
 
     0.405
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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