STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF57734.1Transporter, major facilitator family protein; KEGG: cai:Caci_8679 3.1e-12 sugar transporter; Psort location: CytoplasmicMembrane, score: 10.00. (368 aa)    
Predicted Functional Partners:
EGF54286.1
AMP-binding enzyme; KEGG: bur:Bcep18194_B0673 4.4e-238 non-ribosomal peptide synthetase modules K12240; Psort location: Cytoplasmic, score: 9.95.
 
 
 0.510
EGF57735.1
Hypothetical protein; KEGG: syn:sll0794 1.0e-06 merR; mercuric resistance operon regulatory protein precorrin isomerase; K06042 precorrin-8X methylmutase; Psort location: Cytoplasmic, score: 7.50.
       0.506
EGF50230.1
Flavodoxin-like protein; KEGG: ssa:SSA_1923 4.2e-43 NADPH-quinone reductase (modulator of drug activity B), putative; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.451
EGF56185.1
KEGG: rru:Rru_A1450 0.0065 ArsR family transcriptional regulator K03741; Psort location: Cytoplasmic, score: 7.50.
 
     0.446
EGF55325.1
Transporter, major facilitator family protein; KEGG: rcu:RCOM_2110210 1.4e-16 Multidrug resistance protein mdtM, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.415
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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