STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF57037.1Putative CoA ligase; KEGG: saq:Sare_2221 2.0e-139 long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase; Psort location: Cytoplasmic, score: 9.97. (594 aa)    
Predicted Functional Partners:
EGF53505.1
MaoC-like protein; KEGG: bde:BDP_0362 0. fas; fatty acid synthase Fas K11533.
  
 
 0.973
EGF57036.1
CoA ligase; KEGG: saq:Sare_2221 1.5e-141 long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase; Psort location: Cytoplasmic, score: 9.97.
 
  
 
0.958
EGF54286.1
AMP-binding enzyme; KEGG: bur:Bcep18194_B0673 4.4e-238 non-ribosomal peptide synthetase modules K12240; Psort location: Cytoplasmic, score: 9.95.
 
 0.947
EGF54289.1
AMP-binding enzyme; KEGG: eci:UTI89_C2214 8.1e-230 putative peptide synthetase; Psort location: Cytoplasmic, score: 9.95.
 
0.862
acpP
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 0.768
EGF54288.1
Putativeadenylate synthase; KEGG: vei:Veis_2432 4.8e-97 AMP-dependent synthetase and ligase; K04783 yersiniabactin salicyl-AMP ligase; Psort location: Cytoplasmic, score: 9.97.
 
  
0.739
EGF55170.1
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
    
  0.720
EGF54268.1
AMP-binding enzyme; KEGG: cfl:Cfla_1398 4.6e-163 AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase; Psort location: Cytoplasmic, score: 9.97.
 
  
 
0.676
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
   0.673
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
    
   0.673
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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