STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF57042.1KEGG: asa:ASA_0730 0.0032 MarR family transcriptional regulator; K03828 putative acetyltransferase; Psort location: Cytoplasmic, score: 7.50. (142 aa)    
Predicted Functional Partners:
EGF53547.1
PTS system, sucrose-specific, EIIBCA component; KEGG: cgt:cgR_2547 1.1e-177 hypothetical protein; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.731
EGF53725.1
Phosphotransferase system, EIIC; KEGG: car:cauri_2289 2.6e-208 ptsG; PTS system, glucose-specific IIABC component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.731
EGF53777.1
KEGG: son:SO_0916 9.0e-06 MarR family transcriptional regulator; K03828 putative acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.667
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
       0.526
EGF53778.1
Glyoxalase family protein; KEGG: hse:Hsero_3173 2.5e-06 lactoylglutathione lyase K06996; Psort location: CytoplasmicMembrane, score: 8.16.
 
     0.503
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.