STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF56812.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (99 aa)    
Predicted Functional Partners:
EGF56813.1
Carbon starvation protein CstA; KEGG: mst:Msp_1452 0.0079 ehbF; hydrogenase subunit F K14115; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.946
EGF55342.1
CobW/P47K protein; KEGG: rsa:RSal33209_1680 4.5e-07 nitrile hydratase subunit beta; Psort location: Cytoplasmic, score: 7.50.
  
    0.466
EGF56814.1
Conserved domain protein; Psort location: Cytoplasmic, score: 7.50.
       0.458
EGF56811.1
VanZ-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.430
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.