STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF55681.1Hypothetical protein; KEGG: hse:Hsero_2949 1.8e-06 GTP-binding protein K03977; Psort location: CytoplasmicMembrane, score: 8.78. (122 aa)    
Predicted Functional Partners:
EGF55741.1
Ferrous iron transport protein B; Psort location: CytoplasmicMembrane, score: 10.00.
     0.993
EGF55682.1
FeoA domain protein.
 
    0.929
EGF55685.1
FeoA domain protein; KEGG: nml:Namu_1837 0.0030 short-chain dehydrogenase/reductase SDR; K00034 glucose 1-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
    0.784
EGF55683.1
NifU-like protein; KEGG: apb:SAR116_1595 6.5e-06 nitrogen-fixing NifU domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.684
EGF55740.1
KEGG: lsp:Bsph_2865 2.4e-15 MutT/NUDIX family protein; Psort location: Cytoplasmic, score: 7.50.
       0.433
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.