STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF55222.1Carboxylate-amine ligase, YbdK family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (408 aa)    
Predicted Functional Partners:
EGF53753.1
Aldehyde dehydrogenase family protein; KEGG: art:Arth_3884 0. L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase K13821; Psort location: Cytoplasmic, score: 9.95.
  
 
  0.855
EGF52247.1
Hypothetical protein; KEGG: mei:Msip34_2592 0.00022 glutathione synthetase K01920; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.804
EGF50187.1
KEGG: sgo:SGO_1636 7.4e-101 cystathionine gamma-synthase K01739; Psort location: Cytoplasmic, score: 9.97.
     
 0.773
EGF55223.1
Hypothetical protein; KEGG: mma:MM_1487 2.1e-06 methyltransferase; K00599; Psort location: Cytoplasmic, score: 7.50.
       0.609
EGF55261.1
KEGG: pak:HMPREF0675_3499 2.3e-225 mmsA; methylmalonate-semialdehyde dehydrogenase (acylating) K00140; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.604
EGF49895.1
KEGG: msm:MSMEG_0582 7.7e-154 succinic semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+); Psort location: Cytoplasmic, score: 9.67.
   
 
  0.604
EGF49899.1
KEGG: rsa:RSal33209_2605 1.6e-160 aminobutyraldehyde dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.604
EGF50276.1
Glutamine amidotransferase, class-I family protein; KEGG: aau:AAur_3417 5.1e-70 glutamine amidotransferase K01951.
 
     0.584
EGF57807.1
Putative NADPH-ferredoxin reductase FprA.
  
  
  0.549
EGF55424.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.536
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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