STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF55233.1Toxin secretion/phage lysis holin; KEGG: apb:SAR116_0788 8.0e-14 Na+/solute symporter (Ssf family); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (572 aa)    
Predicted Functional Partners:
EGF53753.1
Aldehyde dehydrogenase family protein; KEGG: art:Arth_3884 0. L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase K13821; Psort location: Cytoplasmic, score: 9.95.
  
  
 0.969
EGF55232.1
Hypothetical protein; KEGG: tkm:TK90_1419 0.0069 V-type H(+)-translocating pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.917
EGF56813.1
Carbon starvation protein CstA; KEGG: mst:Msp_1452 0.0079 ehbF; hydrogenase subunit F K14115; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.580
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
    0.565
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.483
EGF55424.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.405
EGF57730.1
KEGG: ahe:Arch_1433 1.3e-160 citrate synthase I K01647; Psort location: Cytoplasmic, score: 9.95.
   
  
 0.404
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.