STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF55326.1Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 7.50. (198 aa)    
Predicted Functional Partners:
EGF55325.1
Transporter, major facilitator family protein; KEGG: rcu:RCOM_2110210 1.4e-16 Multidrug resistance protein mdtM, putative; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.813
EGF56187.1
KEGG: bpm:BURPS1710b_A2293 0.0070 TetR family transcriptional regulator K00356.
  
     0.670
EGF55667.1
Efflux ABC transporter, permease protein; KEGG: ccs:CCNA_01834 2.2e-06 oxidoreductase K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.639
EGF54295.1
ABC-2 type transporter; KEGG: aai:AARI_02020 0.00034 putative ABC transporter, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.531
EGF56394.1
Acetyltransferase, GNAT family; KEGG: scl:sce7818 5.4e-11 rimI3; ribosomal-protein-alanine N-acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.519
EGF55944.1
Transcriptional regulator, MarR family.
  
     0.517
EGF57003.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: xfn:XfasM23_1953 2.1e-12 cellulase K01179; Psort location: Cellwall, score: 9.98.
  
     0.505
EGF55327.1
Conserved domain protein.
       0.504
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.