STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF55389.1AP endonuclease, family 2; KEGG: rsa:RSal33209_2728 5.8e-62 endonuclease IV; Psort location: CytoplasmicMembrane, score: 8.16. (282 aa)    
Predicted Functional Partners:
EGF55388.1
Hypothetical protein.
 
     0.738
EGF50576.1
KEGG: aai:AARI_10020 3.1e-24 putative GNAT-family acetyltransferase; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.597
EGF54555.1
Lsr2 family protein; KEGG: xce:Xcel_2129 0.0053 DNA polymerase III, epsilon subunit; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 7.50.
  
     0.594
EGF55507.1
Chorismate binding enzyme; KEGG: bgl:bglu_2g09260 1.6e-96 anthranilate/para-aminobenzoate synthasecomponent I; K13063 phenazine biosynthesis protein phzE; Psort location: Cytoplasmic, score: 9.95.
    
  0.579
EGF55260.1
Thiamine pyrophosphate enzyme, central domain protein; KEGG: pfr:PFREUD_19090 2.3e-289 iolD; IolD (myo-inositol catabolism IolD protein) (acetolactate synthase protein) (pyruvate:pyruvate acetaldehydetransferase (decarboxylating)) K03336; Psort location: Cytoplasmic, score: 9.67; Belongs to the TPP enzyme family.
  
 
 0.575
tatB
Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
  
     0.562
EGF52233.1
Type III restriction enzyme, res subunit; KEGG: hvo:HVO_1598 9.2e-07 rad25c; DNA repair helicase RAD25; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.543
EGF55386.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
       0.469
EGF55387.1
MgtE intracellular domain protein; KEGG: pmt:PMT0126 2.0e-16 Mg2+ transporter K06213; Psort location: Cytoplasmic, score: 7.50.
       0.469
EGF49924.1
Acetyltransferase, GNAT family; KEGG: xce:Xcel_0392 1.5e-54 GCN5-related N-acetyltransferase; K00619 amino-acid N-acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.450
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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