STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF55016.1Conserved domain protein; Psort location: CytoplasmicMembrane, score: 9.55; overlaps another CDS with the same product name. (182 aa)    
Predicted Functional Partners:
EGF55015.1
Conserved domain protein; Psort location: Cytoplasmic, score: 7.50; overlaps another CDS with the same product name.
       0.807
EGF55014.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.805
EGF55017.1
Conserved domain protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.778
EGF55018.1
Sigma-70 region 2; KEGG: reh:H16_A2563 2.2e-21 rpoE1; RNA polymerase sigma factor RpoE K03088; Psort location: Cytoplasmic, score: 9.97; Belongs to the sigma-70 factor family. ECF subfamily.
       0.778
EGF55019.1
Conserved domain protein; Psort location: Cytoplasmic, score: 7.50.
       0.778
EGF55020.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.778
EGF55013.1
Putative alkaline shock protein 23; Psort location: Cytoplasmic, score: 7.50.
       0.707
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.