STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF54801.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (367 aa)    
Predicted Functional Partners:
EGF54802.1
Von Willebrand factor type A domain protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.959
EGF54804.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.952
EGF54800.1
Conserved domain protein; KEGG: ath:AT5G27870 4.5e-12 pectinesterase family protein; Psort location: Cellwall, score: 9.20.
       0.826
EGF54803.1
Hypothetical protein.
       0.826
EGF54805.1
ATPase family; KEGG: bcv:Bcav_3957 1.9e-125 ATPase associated with various cellular activities AAA_3; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 9.97.
 
     0.821
EGF54799.1
Hydrolase, NUDIX family; KEGG: ach:Achl_1487 3.0e-26 NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.778
EGF55978.1
Tat pathway signal sequence domain protein.
  
     0.638
EGF54798.1
Transcriptional regulator, TetR family; KEGG: rba:RB2143 0.0047 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662.
 
 
   0.603
EGF54807.1
Hypothetical protein.
 
     0.571
EGF54797.1
Hypothetical protein; KEGG: nca:Noca_1340 0.00017 PAS/PAC sensor signal transduction histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.496
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.