STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF54385.1Conserved domain protein. (336 aa)    
Predicted Functional Partners:
EGF54383.1
KEGG: mdi:METDI1668 3.6e-21 ABC transporter, permease component; putative taurine transporter K02050; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.950
EGF54386.1
KEGG: sen:SACE_1674 2.1e-32 ABC transporter, ATP-binding protein K02049; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.697
EGF55570.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1759 1.9e-63 nitrate/sulfonate/bicarbonate ABC transporter ATPase K02049; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.615
EGF56605.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.602
EGF54382.1
Cupin domain protein; KEGG: cco:CCC13826_0495 9.9e-06 5'-nucleotidase SurE.
       0.596
EGF55569.1
KEGG: apb:SAR116_2100 6.4e-19 ABC transporter permease protein K02050; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.588
EGF54384.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.572
EGF56618.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.537
EGF56599.1
Conserved domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.531
EGF56606.1
Hypothetical protein; KEGG: met:M446_3896 0.0011 cytochrome c oxidase; K02276 cytochrome c oxidase subunit III; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.528
Your Current Organism:
Actinomyces sp. F0386
NCBI taxonomy Id: 762963
Other names: A. sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 str. F0386, Actinomyces sp. oral taxon 170 strain F0386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.